CDS
| Accession Number | TCMCG065C29950 |
| gbkey | CDS |
| Protein Id | XP_004981396.1 |
| Location | complement(join(2916466..2916669,2916783..2917180,2917549..2917669,2917758..2917926,2918420..2918490,2918577..2918790,2918901..2919381,2919654..2919765,2919844..2919898,2919996..2920078,2920165..2920215,2920906..2921045,2921541..2921674,2921899..2921989,2922077..2922166,2922253..2922383,2922665..2922701,2922798..2922858,2922941..2923081)) |
| Gene | LOC101755250 |
| GeneID | 101755250 |
| Organism | Setaria italica |
Protein
| Length | 927aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA207554 |
| db_source | XM_004981339.3 |
| Definition | RNA-binding protein 28 [Setaria italica] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | RNA recognition motif |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14573
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGCAAGCGGAAGCAGCGCGGCGGCGGCGGCGGAGAACCCGCCGGGGAAGGCGAAGCGGCCACAGGCGGCACTGGAGGTGGGCACAGCCCGTCCACCGTGTTCGTCTCCAACCTGCCCTATACCTTCAAGTCCTCCGATCTCGAGGCGGTGTTTAGCGAGGTCGGCCCGGTGCGGCGTTGCTTCATGGTTGCGGAGAAAGGATCGGAGACGAGTCGAGGCTTTGGGTTCGTGCAATTCGCAACTGTTCAAGATGCTGAGCGAGCTATTCAACAAAAGAATGGATTTCCTGTTGCTGGTAGGAAAATCAGAGTTAAGCTAGCAATAAATCGTGCCCCACTGAAGGAACGCTTGCAAAAGAAAGAGAATATACAAGCAAAGGACTCTGATGCAAAAGATGAAGCAGATGATACTTCTGCTACTGTAAAGCATAAGGAGAGTTCCATTAAGGCAGATTCAGAGAAACCACAGCTGTTGGCAAAGGATGCTATGGTATCAAAGGAAGCTTCCATTGGTGACAGCGATAAAGTGAAAAGTTCTGAAAAGCAAAGGGTTGCAAAAACGGTGATTTTTGGTGGTCTGCCAGACTTTGCCATGGCCAGTGAGGTTTTCCGTCAAGCTGGAGAGATTGGTCCGGTTGTATCTGTAAACTATCCACTTCCCAAAGAGGAAATGGAACTCCATGGACTTGCTCGAGATGGATGCACATCAGATGCAGCAGCTGTACTCTTTGCAAGTGTCAAATCGGCTTGGGATTCTGTTGTCCGCCTACATCGTAAGGAAGTCAAGGGAGCAATTGTTTGGGCTCGCCAACTTGGAGGAGAGGGTTCAAAGATCAGGAAATGGCGAGTGATTGTCAGGAACCTGCCATTCAAGATTACAGAAAAGGAGATAATGGATATGTTCAGTTCAGCAGGGTTTGTCTGGGATGTGTCTATTCCTCATAAGTCTGATGAGGGGTTATCAAAAGGCTTTGCTTTTGTATCATTCACACGGAAGCAGGATGCAGAAAATGCTATAAAAAATATTAATGGAAAAGTTGTAGCTAAGAGACCGGTGGCTGTTGATTGGGCTGTTCCAAAAAAAGTATACACTGTTGCGGCAAAATCAGGTGCCGAGGATAATGAGCTTGCGAATGTACCTGACGATGGCAGTGATGATGACACCTCTGAAGAGAACCTTGTTGGAGAAGATGATAGCTCTGAACTTGATCAGGAGATTTCTAATCGTCCATCTGAGGATGATTTCAAAACTGAAGTAGATATTTCTAGAAAAGTTCTTGAAAATTTGATCAAGTCATCAGAGAAGTCTGAACCATCTGGTGTTGACGGTTCAGATATTGATACTGACACTGAAACAGAAAATGACACTCCAGAAAAGAAGAAACCTGAGTCACCTGTAGCTGGCAAGTCGGCTAAGTCGAAACGTGTAACAGATGCAAAAATCACTGATCCTGCTTCCAAACCTGATAAAAAGGATACAGACCTGGATAGGACTATATTCATCAGCAACCTTCCTTTTGATATAAGTAACGAGGAGGTAACAAAGCGCTTCTCAGTTTTTGGGAAGGTTGAATCTTTCTTCCCGGTTCTTCATAAACTCACAAAGAGACCTAGAGGTACTGGTTTCCTGAAGTTTTCTACTGCAGAGGCAGCTGATGCAGCAGTTTCTGCCGCCAATGCTGCTCCTGGCTTAGGTATATTTATGAAGAGTAGGGCACTTAATGTTATGAAAGCAATGGACAAGGAGTCGGCTCACAAAAAGGCACTTGACAAGGCAAAAACTGAGGTTGAGGATAGACGGAATCTGTACTTGGCCAAGGAGGGTGAAATACTTGCTGGAACACCAGCTGCTGAAGGTGTGTCAGATGCTGACATGAATAAACGTAACTGGTTGGCTAGAAGGAAAGCGGAGATGCTTCAGTCTCCAAAGTTTCACGTGTCCAAAACAAGGCTTATCATCTACAATTTGCCTAAGACTATGACCATTAATGATGTAAAGAAGCTTTGCAGAGAAGCAGTCATTTCTCGTGCTACCAGACAAAATCCTGTCATCCGGAAGGTAAATATCCTGAAGAATGAAAAGAAAGGGGTACAGAAACATTCGCGTGGTGTAGCCTTTGTTGATTTTCAAGAACATGAGCACGCTCTTGTCGCTCTAAGAGTTCTAAACAACAACCCTGAAACCTTTGGTGCAGAACGGCGTCCAATTGTGGAGTTTGCTCTTGAGGATGTTGAAAAGGTTAGGCTTCAGAAGATTCGAATGGAACGCAATCGGAAGTCAGCAGCAGAAGCTGCAGAAGATCAGCAGAGTCCTTCAGGGGATCAACCTGCAGGCGATGGCAGTCATGCAGGTAGCAGAAGGACATTCAGAAAAGGTAACAAGCAGAGATCACATGATAGACCATCTAAACCATCCGATTCTGGCGAAGGGCCTGCCAAGGATCCTGTTGCTGGAGATCAAAGTGCTGTGGAAGGTGTAAGAAAGGGAAGACCTGCAAAGAGATCAAGGAAGTCAAATGAGGGTACCGTTTTGGCAGATCGAGATCGAAAAGATGCAACCCCAATTGCTGCTGGGAATCAAGCTGTGTCGAGCGAGCATGATCAATCAGTTGCTCCCAAGAAAAGGAAAAACAGAAAAGACGGCCAGACAGAGCAAAAGAGAGGAAAGGCTACAAAAAGGACAAGGAAAGAACCTACCGGGGAAGGAGGCGTCGATAAGTCACTGGTGGAGCAGTATCGTTCCAAATTCTTGCAACATGGCGTGAGCAAAACCAAAGCGTAG |
| Protein: MGKRKQRGGGGGEPAGEGEAATGGTGGGHSPSTVFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAEKGSETSRGFGFVQFATVQDAERAIQQKNGFPVAGRKIRVKLAINRAPLKERLQKKENIQAKDSDAKDEADDTSATVKHKESSIKADSEKPQLLAKDAMVSKEASIGDSDKVKSSEKQRVAKTVIFGGLPDFAMASEVFRQAGEIGPVVSVNYPLPKEEMELHGLARDGCTSDAAAVLFASVKSAWDSVVRLHRKEVKGAIVWARQLGGEGSKIRKWRVIVRNLPFKITEKEIMDMFSSAGFVWDVSIPHKSDEGLSKGFAFVSFTRKQDAENAIKNINGKVVAKRPVAVDWAVPKKVYTVAAKSGAEDNELANVPDDGSDDDTSEENLVGEDDSSELDQEISNRPSEDDFKTEVDISRKVLENLIKSSEKSEPSGVDGSDIDTDTETENDTPEKKKPESPVAGKSAKSKRVTDAKITDPASKPDKKDTDLDRTIFISNLPFDISNEEVTKRFSVFGKVESFFPVLHKLTKRPRGTGFLKFSTAEAADAAVSAANAAPGLGIFMKSRALNVMKAMDKESAHKKALDKAKTEVEDRRNLYLAKEGEILAGTPAAEGVSDADMNKRNWLARRKAEMLQSPKFHVSKTRLIIYNLPKTMTINDVKKLCREAVISRATRQNPVIRKVNILKNEKKGVQKHSRGVAFVDFQEHEHALVALRVLNNNPETFGAERRPIVEFALEDVEKVRLQKIRMERNRKSAAEAAEDQQSPSGDQPAGDGSHAGSRRTFRKGNKQRSHDRPSKPSDSGEGPAKDPVAGDQSAVEGVRKGRPAKRSRKSNEGTVLADRDRKDATPIAAGNQAVSSEHDQSVAPKKRKNRKDGQTEQKRGKATKRTRKEPTGEGGVDKSLVEQYRSKFLQHGVSKTKA |